Methylomonas koyamae strain LM6

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas koyamae strain LM6 is characterized by having a single replicon, which contributes to its genetic stability and regulatory mechanisms within the cell. The strain is cataloged under the accession number NZ_CP023670.1, indicating its genetic sequence is available in public databases, facilitating further research and comparison with other strains. As a member of the Methylomonas genus, M. koyamae is likely to possess metabolic pathways that enable it to utilize methane as a carbon source, which is a defining trait of many methanotrophic bacteria. This capability suggests that Methylomonas koyamae plays a significant role in the carbon cycle, particularly in environments where methane is prevalent, such as wetlands or areas impacted by methane emissions. The ecological implications of Methylomonas koyamae strain LM6 are noteworthy. As a methanotroph, it potentially contributes to the mitigation of greenhouse gas emissions by consuming methane, thus helping to reduce its concentration in the atmosphere. This biological function highlights the importance of M. koyamae not only in microbial ecology but also in addressing climate change challenges through its involvement in methane oxidation processes. In summary, Methylomonas koyamae strain LM6, with its single replicon and documented genetic information, represents a crucial player in methane metabolism and offers insights into microbial contributions to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas koyamae
Strainstrain LM6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatterrestrial ecosystems; terrestrial environments; waste stabilization pond; wetland
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas koyamae strain LM6 plasmid pLM6, complete sequence.

Gene Summary

Adenine Count

45501 bp

Thymine Count

46184 bp

Guanine Count

47826 bp

Cytosine Count

47147 bp

Genome Length

186658 bp

Protein-coding Genes

162 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulator substrate-binding proteinMKLM6_RS22135Not AvailablePositive24830 - 2553726802.5
phage integrase family proteinMKLM6_RS22140Not AvailableNegative25753 - 2734559344.6
dna-binding proteinMKLM6_RS22145Not AvailableNegative27456 - 2837335155.9
hypothetical proteinMKLM6_RS22150Not AvailablePositive28604 - 2929325945.6
hypothetical proteinMKLM6_RS22155Not AvailablePositive29527 - 2983512052.4
duf1173 domain-containing proteinMKLM6_RS22160Not AvailablePositive30112 - 3133845751.8
duf6876 family proteinMKLM6_RS22165Not AvailablePositive31382 - 3174113479.1
prtrc system parb family proteinMKLM6_RS22170Not AvailablePositive32019 - 3395670509.4
hypothetical proteinMKLM6_RS22175Not AvailablePositive33959 - 3439615624.4
prtrc system protein cMKLM6_RS22180Not AvailablePositive34408 - 346237802.58

Displaying genes 31 – 40 of 162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.