Methylomonas koyamae strain LM6

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas koyamae strain LM6 is characterized by having a single replicon, which contributes to its genetic stability and regulatory mechanisms within the cell. The strain is cataloged under the accession number NZ_CP023670.1, indicating its genetic sequence is available in public databases, facilitating further research and comparison with other strains. As a member of the Methylomonas genus, M. koyamae is likely to possess metabolic pathways that enable it to utilize methane as a carbon source, which is a defining trait of many methanotrophic bacteria. This capability suggests that Methylomonas koyamae plays a significant role in the carbon cycle, particularly in environments where methane is prevalent, such as wetlands or areas impacted by methane emissions. The ecological implications of Methylomonas koyamae strain LM6 are noteworthy. As a methanotroph, it potentially contributes to the mitigation of greenhouse gas emissions by consuming methane, thus helping to reduce its concentration in the atmosphere. This biological function highlights the importance of M. koyamae not only in microbial ecology but also in addressing climate change challenges through its involvement in methane oxidation processes. In summary, Methylomonas koyamae strain LM6, with its single replicon and documented genetic information, represents a crucial player in methane metabolism and offers insights into microbial contributions to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas koyamae
Strainstrain LM6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatterrestrial ecosystems; terrestrial environments; waste stabilization pond; wetland
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas koyamae strain LM6 plasmid pLM6, complete sequence.

Gene Summary

Adenine Count

45501 bp

Thymine Count

46184 bp

Guanine Count

47826 bp

Cytosine Count

47147 bp

Genome Length

186658 bp

Protein-coding Genes

162 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMKLM6_RS22080Not AvailableNegative17079 - 1742613200.7
phage recombination protein betMKLM6_RS22085Not AvailableNegative17517 - 1865341916.1
endoribonuclease mazfMKLM6_RS22095Not AvailableNegative18930 - 1926812138.8
abrb/maze/spovt family dna-binding domain-containing proteinMKLM6_RS22100Not AvailableNegative19268 - 195168911.75
dna-binding proteinMKLM6_RS22105Not AvailablePositive19855 - 2076033245.3
alpha/beta hydrolase family esteraseMKLM6_RS22110Not AvailableNegative21103 - 2199932433.7
hypothetical proteinMKLM6_RS22115Not AvailableNegative22045 - 2265022391.1
ethd family reductaseMKLM6_RS22120Not AvailableNegative22693 - 2301911904.2
is5/is1182 family transposaseMKLM6_RS22125Not AvailablePositive23137 - 232865595.65
is5 family transposaseMKLM6_RS22130Not AvailablePositive23412 - 2475851442.1

Displaying genes 21 – 30 of 162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.