Methylomonas koyamae strain LM6

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas koyamae strain LM6 is characterized by having a single replicon, which contributes to its genetic stability and regulatory mechanisms within the cell. The strain is cataloged under the accession number NZ_CP023670.1, indicating its genetic sequence is available in public databases, facilitating further research and comparison with other strains. As a member of the Methylomonas genus, M. koyamae is likely to possess metabolic pathways that enable it to utilize methane as a carbon source, which is a defining trait of many methanotrophic bacteria. This capability suggests that Methylomonas koyamae plays a significant role in the carbon cycle, particularly in environments where methane is prevalent, such as wetlands or areas impacted by methane emissions. The ecological implications of Methylomonas koyamae strain LM6 are noteworthy. As a methanotroph, it potentially contributes to the mitigation of greenhouse gas emissions by consuming methane, thus helping to reduce its concentration in the atmosphere. This biological function highlights the importance of M. koyamae not only in microbial ecology but also in addressing climate change challenges through its involvement in methane oxidation processes. In summary, Methylomonas koyamae strain LM6, with its single replicon and documented genetic information, represents a crucial player in methane metabolism and offers insights into microbial contributions to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas koyamae
Strainstrain LM6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatterrestrial ecosystems; terrestrial environments; waste stabilization pond; wetland
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas koyamae strain LM6 plasmid pLM6, complete sequence.

Gene Summary

Adenine Count

45501 bp

Thymine Count

46184 bp

Guanine Count

47826 bp

Cytosine Count

47147 bp

Genome Length

186658 bp

Protein-coding Genes

162 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMKLM6_RS22665Not AvailableNegative164883 - 16548522206.0
ethd family reductaseMKLM6_RS22670Not AvailableNegative165528 - 16585411907.2
lysr family transcriptional regulatorMKLM6_RS22675Not AvailablePositive165974 - 16684933172.0
tmem175 family proteinMKLM6_RS22680Not AvailableNegative167128 - 16770621546.9
y-family dna polymeraseMKLM6_RS22685Not AvailableNegative168143 - 16945349054.5
tyrosine-type recombinase/integraseMKLM6_RS22690Not AvailableNegative169526 - 17158677554.5
tyrosine-type recombinase/integraseMKLM6_RS22695Not AvailableNegative171716 - 17274439221.8
is5/is1182 family transposaseMKLM6_RS22700Not AvailableNegative172823 - 1730508466.36
translesion error-prone dna polymerase v autoproteolytic subunitMKLM6_RS22705Not AvailableNegative173077 - 17356517833.8
sos response-associated peptidase family proteinMKLM6_RS22710Not AvailablePositive173650 - 1739139870.94

Displaying genes 141 – 150 of 162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.