Brachybacterium ginsengisoli strain DCY80

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Brachybacterium

Description

Brachybacterium ginsengisoli strain DCY80 is characterized by having a single replicon and is cataloged under the accession number NZ_CP023564.1. This bacterium belongs to the genus Brachybacterium, which is known for its role in various ecological niches, particularly in soil and plant-associated environments. The strain DCY80 is particularly noteworthy for its association with ginseng, a plant of significant economic and medicinal value. The interactions between Brachybacterium ginsengisoli and ginseng could imply potential benefits in terms of plant health, nutrient cycling, or disease resistance. Such relationships highlight the importance of soil microbiota in supporting plant growth and resilience, particularly in agricultural contexts. While detailed metabolic pathways, ecological roles, and physiological traits of strain DCY80 are not included here, the presence of a single replicon suggests a streamlined genomic organization, which may influence its adaptability and functionality in its habitat. Understanding the genomic and ecological attributes of Brachybacterium ginsengisoli strain DCY80 can contribute to insights into its potential applications in ginseng cultivation and broader agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusBrachybacterium
SpeciesBrachybacterium ginsengisoli
Strainstrain DCY80

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brachybacterium ginsengisoli strain DCY80 chromosome, complete

Gene Summary

Adenine Count

561089 bp

Thymine Count

562920 bp

Guanine Count

1412612 bp

Cytosine Count

1416632 bp

Genome Length

3953253 bp

Protein-coding Genes

3462 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phoh family proteinCFK41_RS08180Not AvailablePositive1846271 - 184731737989.7
rrna maturation rnase ybeyCFK41_RS08185Not AvailablePositive1847320 - 184778117246.7
hemolysin family proteinCFK41_RS08190Not AvailablePositive1847828 - 184916247825.7
gtpase eraCFK41_RS08195Not AvailablePositive1849152 - 185013835856.0
2-isopropylmalate synthaseCFK41_RS08200Not AvailablePositive1850483 - 185220163758.1
eama family transporterCFK41_RS08205Not AvailableNegative1852235 - 185329035981.6
lysr family transcriptional regulatorCFK41_RS08210Not AvailablePositive1853349 - 185430834801.0
m28 family peptidaseCFK41_RS08215Not AvailablePositive1854408 - 185664276332.8
methyltransferase domain-containing proteinCFK41_RS08220Not AvailablePositive1856718 - 185748227719.9
ecsc family proteinCFK41_RS08225Not AvailableNegative1857506 - 185822225300.0

Displaying genes 1631 – 1640 of 3524 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.