Brachybacterium ginsengisoli strain DCY80

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Brachybacterium

Description

Brachybacterium ginsengisoli strain DCY80 is characterized by having a single replicon and is cataloged under the accession number NZ_CP023564.1. This bacterium belongs to the genus Brachybacterium, which is known for its role in various ecological niches, particularly in soil and plant-associated environments. The strain DCY80 is particularly noteworthy for its association with ginseng, a plant of significant economic and medicinal value. The interactions between Brachybacterium ginsengisoli and ginseng could imply potential benefits in terms of plant health, nutrient cycling, or disease resistance. Such relationships highlight the importance of soil microbiota in supporting plant growth and resilience, particularly in agricultural contexts. While detailed metabolic pathways, ecological roles, and physiological traits of strain DCY80 are not included here, the presence of a single replicon suggests a streamlined genomic organization, which may influence its adaptability and functionality in its habitat. Understanding the genomic and ecological attributes of Brachybacterium ginsengisoli strain DCY80 can contribute to insights into its potential applications in ginseng cultivation and broader agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusBrachybacterium
SpeciesBrachybacterium ginsengisoli
Strainstrain DCY80

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brachybacterium ginsengisoli strain DCY80 chromosome, complete

Gene Summary

Adenine Count

561089 bp

Thymine Count

562920 bp

Guanine Count

1412612 bp

Cytosine Count

1416632 bp

Genome Length

3953253 bp

Protein-coding Genes

3462 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-glnNot AvailableNot AvailablePositive1660150 - 1660221Not Available
Trna-gluNot AvailableNot AvailablePositive1660255 - 1660327Not Available
Trna-gluNot AvailableNot AvailablePositive1660356 - 1660428Not Available
universal stress proteinCFK41_RS07345Not AvailablePositive1660513 - 166133128448.2
iclr family transcriptional regulatorCFK41_RS07350Not AvailableNegative1661350 - 166208425571.8
3-isopropylmalate dehydratase large subunitCFK41_RS07355Not AvailablePositive1662227 - 166366651434.7
3-isopropylmalate dehydratase small subunitCFK41_RS07360Not AvailablePositive1663699 - 166431322850.8
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCFK41_RS07365Not AvailablePositive1664399 - 166571847304.8
duf2867 domain-containing proteinCFK41_RS07370Not AvailablePositive1665718 - 166629920724.9
lysophospholipid acyltransferase family proteinCFK41_RS07375Not AvailablePositive1666296 - 166709929134.4

Displaying genes 1461 – 1470 of 3524 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.