Pseudomonas frederiksbergensis strain KNU-15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain KNU-15 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP023466.1, which allows for its identification and retrieval in genomic databases. As a member of the Pseudomonas genus, this strain may exhibit typical traits associated with Pseudomonas species, such as metabolic versatility and adaptability to various environments. This adaptability could potentially allow Pseudomonas frederiksbergensis strain KNU-15 to thrive in diverse ecological niches, possibly including soil and plant-associated environments. The presence of only one replicon may suggest a more efficient replication process compared to strains with multiple replicons, potentially leading to rapid growth and adaptation. Understanding the genomic structure and traits of Pseudomonas frederiksbergensis strain KNU-15 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms in its habitat. In summary, Pseudomonas frederiksbergensis strain KNU-15, with its single replicon and genetic accessibility through accession NZ_CP023466.1, holds promise for further research into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain KNU-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain KNU-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain KNU-15


Gene Summary

Adenine Count

1345408 bp

Thymine Count

1335750 bp

Guanine Count

1955777 bp

Cytosine Count

1958869 bp

Genome Length

6595804 bp

Protein-coding Genes

5869 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxygen-dependent coproporphyrinogen oxidaseCNN82_RS30020Not AvailableNegative6543696 - 654461034515.3
nadph:quinone reductaseCNN82_RS30025Not AvailablePositive6544785 - 654576234319.1
l-threonylcarbamoyladenylate synthaseCNN82_RS30030Not AvailableNegative6545916 - 654647320755.9
dna-processing protein dpraCNN82_RS30035Not AvailableNegative6546529 - 654763538788.8
lysm peptidoglycan-binding domain-containing proteinCNN82_RS30040Not AvailableNegative6547716 - 654874137348.8
peptide deformylaseCNN82_RS30045Not AvailablePositive6548911 - 654941719260.2
methionyl-trna formyltransferaseCNN82_RS30050Not AvailablePositive6549488 - 655044733918.1
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCNN82_RS30055Not AvailablePositive6550444 - 655175447221.1
trk system potassium transporter trkaCNN82_RS30060Not AvailablePositive6551777 - 655315049818.1
tetratricopeptide repeat proteinCNN82_RS30065Not AvailablePositive6553293 - 655360711691.0

Displaying genes 5971 – 5980 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.