Pseudomonas frederiksbergensis strain KNU-15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain KNU-15 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP023466.1, which allows for its identification and retrieval in genomic databases. As a member of the Pseudomonas genus, this strain may exhibit typical traits associated with Pseudomonas species, such as metabolic versatility and adaptability to various environments. This adaptability could potentially allow Pseudomonas frederiksbergensis strain KNU-15 to thrive in diverse ecological niches, possibly including soil and plant-associated environments. The presence of only one replicon may suggest a more efficient replication process compared to strains with multiple replicons, potentially leading to rapid growth and adaptation. Understanding the genomic structure and traits of Pseudomonas frederiksbergensis strain KNU-15 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms in its habitat. In summary, Pseudomonas frederiksbergensis strain KNU-15, with its single replicon and genetic accessibility through accession NZ_CP023466.1, holds promise for further research into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain KNU-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain KNU-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain KNU-15


Gene Summary

Adenine Count

1345408 bp

Thymine Count

1335750 bp

Guanine Count

1955777 bp

Cytosine Count

1958869 bp

Genome Length

6595804 bp

Protein-coding Genes

5869 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-aminobutyraldehyde dehydrogenaseCNN82_RS24995Not AvailablePositive5414467 - 541589150885.9
hypothetical proteinCNN82_RS25000Not AvailableNegative5415980 - 54161657195.89
glucan biosynthesis protein dCNN82_RS25005Not AvailablePositive5416578 - 541820360597.4
nadh:flavin oxidoreductase/nadh oxidaseCNN82_RS25010Not AvailableNegative5418277 - 541938340557.1
single-stranded-dna-specific exonuclease recjCNN82_RS25015Not AvailableNegative5419652 - 542136162334.6
yaeq family proteinCNN82_RS25020Not AvailableNegative5421428 - 542197020794.7
caib/baif coa transferase family proteinCNN82_RS25025Not AvailablePositive5422120 - 542331943717.8
tigr02285 family proteinCNN82_RS25030Not AvailablePositive5423300 - 542422634861.4
duf3509 domain-containing proteinCNN82_RS25035Not AvailableNegative5424398 - 542468510224.4
transporter substrate-binding domain-containing proteinCNN82_RS25040Not AvailableNegative5424905 - 542626050612.8

Displaying genes 4971 – 4980 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.