Pseudomonas frederiksbergensis strain KNU-15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain KNU-15 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP023466.1, which allows for its identification and retrieval in genomic databases. As a member of the Pseudomonas genus, this strain may exhibit typical traits associated with Pseudomonas species, such as metabolic versatility and adaptability to various environments. This adaptability could potentially allow Pseudomonas frederiksbergensis strain KNU-15 to thrive in diverse ecological niches, possibly including soil and plant-associated environments. The presence of only one replicon may suggest a more efficient replication process compared to strains with multiple replicons, potentially leading to rapid growth and adaptation. Understanding the genomic structure and traits of Pseudomonas frederiksbergensis strain KNU-15 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms in its habitat. In summary, Pseudomonas frederiksbergensis strain KNU-15, with its single replicon and genetic accessibility through accession NZ_CP023466.1, holds promise for further research into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain KNU-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain KNU-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain KNU-15


Gene Summary

Adenine Count

1345408 bp

Thymine Count

1335750 bp

Guanine Count

1955777 bp

Cytosine Count

1958869 bp

Genome Length

6595804 bp

Protein-coding Genes

5869 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCNN82_RS23710Not AvailablePositive5118124 - 511850114414.5
long-chain-fatty-acid--coa ligase fadd1CNN82_RS23715Not AvailableNegative5118719 - 512041961803.6
long-chain-fatty-acid--coa ligase fadd2CNN82_RS23720Not AvailableNegative5120798 - 512248661668.1
alpha/beta hydrolaseCNN82_RS23725Not AvailablePositive5122720 - 512366434684.3
maoc family dehydrataseCNN82_RS23730Not AvailablePositive5123709 - 512417917064.7
ferritin-like domain-containing proteinCNN82_RS23735Not AvailableNegative5124414 - 512488117344.2
duf3820 family proteinCNN82_RS23740Not AvailablePositive5125085 - 51253218858.86
aminotransferase class v-fold plp-dependent enzymeCNN82_RS23745Not AvailablePositive5125346 - 512652744220.1
intradiol ring-cleavage dioxygenaseCNN82_RS23750Not AvailableNegative5126530 - 512725526760.5
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseCNN82_RS23755Not AvailableNegative5127496 - 512816123176.5

Displaying genes 4711 – 4720 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.