Pseudomonas frederiksbergensis strain KNU-15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain KNU-15 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP023466.1, which allows for its identification and retrieval in genomic databases. As a member of the Pseudomonas genus, this strain may exhibit typical traits associated with Pseudomonas species, such as metabolic versatility and adaptability to various environments. This adaptability could potentially allow Pseudomonas frederiksbergensis strain KNU-15 to thrive in diverse ecological niches, possibly including soil and plant-associated environments. The presence of only one replicon may suggest a more efficient replication process compared to strains with multiple replicons, potentially leading to rapid growth and adaptation. Understanding the genomic structure and traits of Pseudomonas frederiksbergensis strain KNU-15 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms in its habitat. In summary, Pseudomonas frederiksbergensis strain KNU-15, with its single replicon and genetic accessibility through accession NZ_CP023466.1, holds promise for further research into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain KNU-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain KNU-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain KNU-15 chromosome, complete

Gene Summary

Adenine Count

1345408 bp

Thymine Count

1335750 bp

Guanine Count

1955777 bp

Cytosine Count

1958869 bp

Genome Length

6595804 bp

Protein-coding Genes

5869 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arnt family glycosyltransferaseCNN82_RS15255Not AvailablePositive3300506 - 330203557802.6
iron abc transporter substrate-binding proteinCNN82_RS15260Not AvailablePositive3302237 - 330325336059.7
abc transporter permeaseCNN82_RS15265Not AvailablePositive3303254 - 330485556702.1
abc transporter atp-binding proteinCNN82_RS15270Not AvailablePositive3304852 - 330592238164.9
udp-4-amino-4-deoxy-l-arabinose aminotransferaseCNN82_RS15275Not AvailablePositive3306336 - 330748442023.4
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseCNN82_RS15280Not AvailablePositive3307481 - 330850037276.4
bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arnaCNN82_RS15285Not AvailablePositive3308497 - 331049174038.5
ivy family c-type lysozyme inhibitorCNN82_RS15290Not AvailablePositive3310491 - 331137432534.2
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseCNN82_RS15295Not AvailablePositive3311371 - 331302662178.1
4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arneCNN82_RS15300Not AvailablePositive3313023 - 331336712634.0

Displaying genes 3031 – 3040 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.