Pseudomonas frederiksbergensis strain KNU-15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain KNU-15 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP023466.1, which allows for its identification and retrieval in genomic databases. As a member of the Pseudomonas genus, this strain may exhibit typical traits associated with Pseudomonas species, such as metabolic versatility and adaptability to various environments. This adaptability could potentially allow Pseudomonas frederiksbergensis strain KNU-15 to thrive in diverse ecological niches, possibly including soil and plant-associated environments. The presence of only one replicon may suggest a more efficient replication process compared to strains with multiple replicons, potentially leading to rapid growth and adaptation. Understanding the genomic structure and traits of Pseudomonas frederiksbergensis strain KNU-15 can provide insights into its ecological roles, particularly in nutrient cycling and interactions with other microorganisms in its habitat. In summary, Pseudomonas frederiksbergensis strain KNU-15, with its single replicon and genetic accessibility through accession NZ_CP023466.1, holds promise for further research into its ecological functions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain KNU-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain KNU-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain KNU-15


Gene Summary

Adenine Count

1345408 bp

Thymine Count

1335750 bp

Guanine Count

1955777 bp

Cytosine Count

1958869 bp

Genome Length

6595804 bp

Protein-coding Genes

5869 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mannuronate-specific alginate lyaseCNN82_RS05395Not AvailableNegative1133898 - 113502241967.7
alginate o-acetyltransferaseCNN82_RS05400Not AvailableNegative1135043 - 113649753676.4
mannuronan 5-epimerase alggCNN82_RS05405Not AvailableNegative1136508 - 113809758276.5
alginate export family proteinCNN82_RS05410Not AvailableNegative1138124 - 113961154835.4
alginate biosynthesis tpr repeat lipoprotein algkCNN82_RS05415Not AvailableNegative1139608 - 114103251617.2
alginate biosynthesis protein alg44CNN82_RS05420Not AvailableNegative1141042 - 114221141982.4
mannuronan synthaseCNN82_RS05430Not AvailableNegative1142247 - 114373156026.2
nucleotide sugar dehydrogenaseCNN82_RS05435Not AvailableNegative1143928 - 114524447631.2
peroxide stress protein yaaaCNN82_RS05440Not AvailableNegative1146080 - 114685929356.1
polysaccharide deacetylase family proteinCNN82_RS05445Not AvailablePositive1147155 - 114827942445.0

Displaying genes 1151 – 1160 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.