Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | CKY39_RS03680 | Not Available | Negative | 832711 - 833679 | 34250.6 |
| lyse family translocator | CKY39_RS03685 | Not Available | Negative | 833698 - 834330 | 22462.3 |
| voc family protein | CKY39_RS03690 | Not Available | Negative | 834335 - 835030 | 24346.2 |
| phzf family phenazine biosynthesis protein | CKY39_RS03695 | Not Available | Negative | 835044 - 835967 | 32443.7 |
| glutathione s-transferase family protein | CKY39_RS03700 | Not Available | Negative | 836100 - 836741 | 24299.9 |
| dj-1/pfpi family protein | CKY39_RS03705 | Not Available | Negative | 836747 - 837382 | 21969.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS03710 | Not Available | Negative | 837397 - 838583 | 42485.4 |
| voc family protein | CKY39_RS03715 | Not Available | Negative | 838633 - 839040 | 14230.8 |
| dmt family transporter | CKY39_RS03720 | Not Available | Negative | 839052 - 839999 | 33169.4 |
| lyse family translocator | CKY39_RS03725 | Not Available | Negative | 839996 - 840595 | 21221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
