Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | CKY39_RS03625 | Not Available | Positive | 819908 - 821260 | 46928.9 |
| gnat family n-acetyltransferase | CKY39_RS03630 | Not Available | Negative | 821276 - 821845 | 20929.0 |
| zinc-binding alcohol dehydrogenase family protein | CKY39_RS03635 | Not Available | Negative | 821865 - 822875 | 35639.1 |
| lysr family transcriptional regulator | CKY39_RS03640 | Not Available | Positive | 822965 - 823873 | 33436.2 |
| sdr family oxidoreductase | CKY39_RS03650 | Not Available | Negative | 824180 - 824977 | 27355.2 |
| pgad family protein | CKY39_RS03655 | Not Available | Negative | 825105 - 825671 | 21096.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | CKY39_RS03660 | Not Available | Negative | 825661 - 826941 | 48836.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | CKY39_RS03665 | Not Available | Negative | 826938 - 829004 | 77198.4 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | CKY39_RS03670 | Not Available | Negative | 829013 - 831547 | 92213.6 |
| creatininase family protein | CKY39_RS03675 | Not Available | Positive | 831867 - 832703 | 28995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
