Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CKY39_RS03575 | Not Available | Positive | 808510 - 809217 | 24918.4 |
| abc transporter atp-binding protein | CKY39_RS03580 | Not Available | Positive | 809225 - 809932 | 24500.2 |
| lysr substrate-binding domain-containing protein | CKY39_RS03585 | Not Available | Negative | 809929 - 810861 | 34051.3 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS03590 | Not Available | Positive | 811024 - 812013 | 34690.1 |
| hypothetical protein | CKY39_RS03595 | Not Available | Positive | 812019 - 813317 | 48999.4 |
| helix-turn-helix domain-containing protein | CKY39_RS03600 | Not Available | Negative | 813328 - 814308 | 36840.0 |
| mfs transporter | CKY39_RS03605 | Not Available | Negative | 814461 - 815768 | 47116.5 |
| redoxin domain-containing protein | CKY39_RS03610 | Not Available | Negative | 815895 - 816587 | 24142.8 |
| protein-disulfide reductase dsbd family protein | CKY39_RS03615 | Not Available | Negative | 816714 - 818885 | 74893.5 |
| alanyl-trna editing protein | CKY39_RS03620 | Not Available | Negative | 819004 - 819777 | 27315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
