Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | CKY39_RS03525 | Not Available | Negative | 796181 - 798256 | 74581.8 |
| uroporphyrinogen decarboxylase | CKY39_RS03530 | Not Available | Negative | 798742 - 799851 | 39706.7 |
| gmc family oxidoreductase | CKY39_RS03535 | Not Available | Positive | 799994 - 801595 | 56839.0 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS03540 | Not Available | Positive | 801666 - 802472 | 27208.8 |
| moaf c-terminal domain-containing protein | CKY39_RS03545 | Not Available | Positive | 802488 - 803288 | 29389.3 |
| nuclear transport factor 2 family protein | CKY39_RS03550 | Not Available | Positive | 803315 - 803707 | 14515.2 |
| aldehyde dehydrogenase family protein | CKY39_RS03555 | Not Available | Positive | 803754 - 805256 | 52694.1 |
| abc transporter substrate-binding protein | CKY39_RS03560 | Not Available | Positive | 805299 - 806564 | 44396.1 |
| branched-chain amino acid abc transporter permease | CKY39_RS03565 | Not Available | Positive | 806577 - 807446 | 30198.8 |
| branched-chain amino acid abc transporter permease | CKY39_RS03570 | Not Available | Positive | 807443 - 808513 | 36843.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
