Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CKY39_RS03475 | Not Available | Negative | 783792 - 786437 | 94666.8 |
| response regulator | CKY39_RS03480 | Not Available | Negative | 786466 - 787203 | 27619.4 |
| ammonia-dependent nad(+) synthetase | CKY39_RS03485 | Not Available | Negative | 787387 - 788235 | 29962.0 |
| phospholipase a | CKY39_RS03490 | Not Available | Negative | 788358 - 789539 | 43420.1 |
| hypothetical protein | CKY39_RS03495 | Not Available | Negative | 789536 - 789997 | 16116.9 |
| atp-dependent helicase | CKY39_RS03500 | Not Available | Negative | 789994 - 792090 | 78132.4 |
| aec family transporter | CKY39_RS03505 | Not Available | Positive | 792239 - 793258 | 34683.7 |
| hypothetical protein | CKY39_RS03510 | Not Available | Negative | 793269 - 793907 | 22455.4 |
| hypothetical protein | CKY39_RS03515 | Not Available | Positive | 794196 - 794405 | 7735.55 |
| s41 family peptidase | CKY39_RS03520 | Not Available | Positive | 794512 - 796158 | 58681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
