Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | CKY39_RS03425 | Not Available | Negative | 770834 - 771829 | 35690.6 |
| fimbria/pilus outer membrane usher protein | CKY39_RS03430 | Not Available | Negative | 771876 - 774437 | 91438.0 |
| molecular chaperone | CKY39_RS03435 | Not Available | Negative | 774518 - 775303 | 28352.0 |
| fimbrial protein | CKY39_RS03440 | Not Available | Negative | 775523 - 776080 | 18243.7 |
| fimbrial protein | CKY39_RS03445 | Not Available | Positive | 776665 - 777201 | 17627.7 |
| molecular chaperone | CKY39_RS03450 | Not Available | Positive | 777267 - 778037 | 27023.5 |
| fimbria/pilus outer membrane usher protein | CKY39_RS03455 | Not Available | Positive | 778122 - 780656 | 88460.9 |
| fimbrial protein | CKY39_RS33065 | Not Available | Positive | 781305 - 781832 | 18081.3 |
| hypothetical protein | CKY39_RS03465 | Not Available | Positive | 782039 - 782494 | 16198.4 |
| helix-turn-helix domain-containing protein | CKY39_RS03470 | Not Available | Negative | 782485 - 783528 | 38523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
