Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS03330 | Not Available | Positive | 746866 - 751341 | 166567.0 |
| is1182 family transposase | CKY39_RS03335 | Not Available | Positive | 751546 - 752982 | 54359.6 |
| helix-turn-helix domain-containing protein | CKY39_RS03340 | Not Available | Positive | 753374 - 753688 | 11613.3 |
| hypothetical protein | CKY39_RS33905 | Not Available | Positive | 753810 - 754271 | 16802.3 |
| atp-binding protein | CKY39_RS33910 | Not Available | Positive | 754271 - 754816 | 19901.0 |
| s8 family peptidase | CKY39_RS03350 | Not Available | Positive | 754820 - 757504 | 97450.8 |
| restriction endonuclease | CKY39_RS03355 | Not Available | Positive | 757518 - 759818 | 87501.6 |
| hypothetical protein | CKY39_RS03360 | Not Available | Negative | 760299 - 761207 | 32674.4 |
| helix-turn-helix transcriptional regulator | CKY39_RS03365 | Not Available | Negative | 761214 - 761534 | 11832.3 |
| hypothetical protein | CKY39_RS34095 | Not Available | Negative | 761552 - 761935 | 14134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
