Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CKY39_RS03240 | Not Available | Positive | 720264 - 721652 | 49679.4 |
| duf4390 domain-containing protein | CKY39_RS03245 | Not Available | Positive | 721705 - 722274 | 21151.4 |
| sensor histidine kinase | CKY39_RS03250 | Not Available | Positive | 722271 - 724601 | 83556.8 |
| response regulator | CKY39_RS03255 | Not Available | Positive | 724679 - 725380 | 25273.4 |
| Trna-phe | Not Available | Not Available | Positive | 725399 - 725474 | Not Available |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34680 | Not Available | Negative | 725824 - 726375 | 19368.2 |
| hypothetical protein | CKY39_RS03270 | Not Available | Negative | 726699 - 727889 | 44720.4 |
| hypothetical protein | CKY39_RS34685 | Not Available | Positive | 727902 - 728030 | 4840.93 |
| hypothetical protein | CKY39_RS03275 | Not Available | Negative | 728073 - 729419 | 50783.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS03280 | Not Available | Negative | 729852 - 730181 | 12505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
