Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 707121 - 707196 | Not Available |
| preprotein translocase subunit sece | CKY39_RS03195 | Not Available | Positive | 707298 - 707681 | 14022.2 |
| transcription termination/antitermination protein nusg | CKY39_RS03200 | Not Available | Positive | 707681 - 708292 | 23078.3 |
| 50s ribosomal protein l11 | CKY39_RS03205 | Not Available | Positive | 708434 - 708865 | 15045.7 |
| 50s ribosomal protein l1 | CKY39_RS03210 | Not Available | Positive | 708866 - 709564 | 24020.4 |
| 50s ribosomal protein l10 | CKY39_RS03215 | Not Available | Positive | 709811 - 710350 | 18552.4 |
| 50s ribosomal protein l7/l12 | CKY39_RS03220 | Not Available | Positive | 710398 - 710772 | 12693.3 |
| dna-directed rna polymerase subunit beta | CKY39_RS03225 | Not Available | Positive | 711074 - 715198 | 152866.0 |
| dna-directed rna polymerase subunit beta' | CKY39_RS03230 | Not Available | Positive | 715220 - 719455 | 154907.0 |
| lema family protein | CKY39_RS03235 | Not Available | Positive | 719571 - 720170 | 20835.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
