Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | CKY39_RS03140 | Not Available | Positive | 700744 - 701136 | 13970.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS03145 | Not Available | Positive | 701133 - 701716 | 21144.3 |
| low-specificity l-threonine aldolase | CKY39_RS03150 | Not Available | Positive | 701723 - 702781 | 37233.6 |
| anthranilate phosphoribosyltransferase | CKY39_RS03155 | Not Available | Positive | 702817 - 703839 | 35936.7 |
| indole-3-glycerol phosphate synthase trpc | CKY39_RS03160 | Not Available | Positive | 703877 - 704677 | 28616.6 |
| uracil-dna glycosylase | CKY39_RS03165 | Not Available | Positive | 704674 - 705396 | 25928.1 |
| Trna-tyr | Not Available | Not Available | Positive | 705491 - 705576 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 705642 - 705715 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 705758 - 705832 | Not Available |
| elongation factor tu | CKY39_RS03185 | Not Available | Positive | 705906 - 707099 | 43030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
