Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate binding protein | CKY39_RS02930 | Not Available | Negative | 648608 - 649615 | 34247.3 |
| hybrid sensor histidine kinase/response regulator | CKY39_RS02935 | Not Available | Negative | 649842 - 651749 | 68343.5 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | CKY39_RS02940 | Not Available | Positive | 651914 - 652975 | 38751.9 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | CKY39_RS02945 | Not Available | Positive | 652972 - 654009 | 37988.8 |
| type vi secretion system baseplate subunit tssk | CKY39_RS02950 | Not Available | Positive | 654195 - 655526 | 49264.5 |
| dotu family type vi secretion system protein | CKY39_RS02960 | Not Available | Positive | 655651 - 656997 | 47838.4 |
| type vi secretion system membrane subunit tssm | CKY39_RS02965 | Not Available | Positive | 656994 - 660596 | 132637.0 |
| type vi secretion system-associated protein tagf | CKY39_RS02970 | Not Available | Positive | 660593 - 661222 | 22654.2 |
| serine/threonine-protein kinase | CKY39_RS02985 | Not Available | Positive | 661995 - 663917 | 67202.2 |
| murein transglycosylase a | CKY39_RS02990 | Not Available | Positive | 663973 - 665556 | 55310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
