Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase/aspartoacylase family protein | CKY39_RS02885 | Not Available | Positive | 630100 - 631092 | 35672.4 |
| hypothetical protein | CKY39_RS33655 | Not Available | Positive | 631250 - 631408 | 5355.48 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS02890 | Not Available | Positive | 631438 - 633626 | 80144.8 |
| chat domain-containing protein | CKY39_RS02895 | Not Available | Positive | 633853 - 635964 | 75351.9 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | CKY39_RS02900 | Not Available | Positive | 636006 - 637727 | 61589.0 |
| filamentous hemagglutinin n-terminal domain-containing protein | CKY39_RS02905 | Not Available | Positive | 637730 - 643207 | 179286.0 |
| glycosyltransferase family 25 protein | CKY39_RS02910 | Not Available | Negative | 643221 - 644087 | 31062.2 |
| glycosyltransferase family 2 protein | CKY39_RS02915 | Not Available | Positive | 644135 - 645880 | 65319.5 |
| hypothetical protein | CKY39_RS02920 | Not Available | Negative | 645838 - 646617 | 28482.8 |
| atp-binding protein | CKY39_RS02925 | Not Available | Negative | 646624 - 648498 | 66184.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
