Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CKY39_RS02835 | Not Available | Positive | 620222 - 621361 | 40944.3 |
| hypothetical protein | CKY39_RS02840 | Not Available | Positive | 621444 - 622229 | 28598.2 |
| isochorismatase family protein | CKY39_RS02845 | Not Available | Negative | 622243 - 622872 | 22638.7 |
| glxa family transcriptional regulator | CKY39_RS02850 | Not Available | Positive | 622980 - 623969 | 35871.2 |
| ybdk family carboxylate-amine ligase | CKY39_RS02855 | Not Available | Negative | 623979 - 625202 | 46016.6 |
| cation:proton antiporter | CKY39_RS02860 | Not Available | Negative | 625199 - 626470 | 44256.4 |
| site-specific recombinase | CKY39_RS02865 | Not Available | Negative | 626467 - 628440 | 71115.7 |
| co2+/mg2+ efflux protein apag | CKY39_RS02870 | Not Available | Negative | 628562 - 628957 | 14136.7 |
| ribulose-phosphate 3-epimerase | CKY39_RS02875 | Not Available | Positive | 629018 - 629713 | 24574.3 |
| hypothetical protein | CKY39_RS02880 | Not Available | Negative | 629703 - 629936 | 8729.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
