Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CKY39_RS34675 | Not Available | Positive | 609796 - 610560 | 28138.8 |
| acg family fmn-binding oxidoreductase | CKY39_RS02790 | Not Available | Positive | 610679 - 611872 | 43150.1 |
| cina family protein | CKY39_RS02795 | Not Available | Negative | 611888 - 612415 | 18066.6 |
| phosphatidylglycerophosphatase a | CKY39_RS02800 | Not Available | Negative | 612409 - 612921 | 18800.1 |
| mfs transporter | CKY39_RS02805 | Not Available | Positive | 613128 - 614588 | 49282.9 |
| fad-dependent oxidoreductase | CKY39_RS02810 | Not Available | Negative | 614585 - 616297 | 63284.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS02815 | Not Available | Negative | 616317 - 617333 | 34836.6 |
| lysr family transcriptional regulator | CKY39_RS02820 | Not Available | Positive | 617433 - 618332 | 32677.9 |
| duf3053 domain-containing protein | CKY39_RS02825 | Not Available | Positive | 618396 - 619121 | 26141.5 |
| thiamine-phosphate kinase | CKY39_RS02830 | Not Available | Negative | 619129 - 620085 | 32608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
