Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CKY39_RS02740 | Not Available | Negative | 601298 - 602236 | 31031.9 |
| lysr family transcriptional regulator | CKY39_RS02745 | Not Available | Positive | 602358 - 603026 | 24554.8 |
| hypothetical protein | CKY39_RS34070 | Not Available | Positive | 603023 - 603268 | 8905.99 |
| putative toxin-antitoxin system toxin component, pin family | CKY39_RS02750 | Not Available | Positive | 603328 - 603753 | 15465.0 |
| hypothetical protein | CKY39_RS02755 | Not Available | Negative | 603770 - 604675 | 32537.1 |
| fmn-binding glutamate synthase family protein | CKY39_RS02760 | Not Available | Negative | 604672 - 606372 | 60852.4 |
| upf0149 family protein | CKY39_RS02765 | Not Available | Positive | 606442 - 607236 | 29817.5 |
| mfs transporter | CKY39_RS02770 | Not Available | Positive | 607607 - 608794 | 41241.5 |
| gnat family n-acetyltransferase | CKY39_RS02775 | Not Available | Negative | 608784 - 609107 | 11940.1 |
| nuclear transport factor 2 family protein | CKY39_RS02780 | Not Available | Negative | 609104 - 609601 | 18363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
