Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative head-tail adaptor | CKY39_RS16210 | Not Available | Positive | 3513979 - 3514263 | 10157.3 |
| Conserved phage protein | CKY39_RS16215 | Not Available | Positive | 3514298 - 3514738 | 15974.9 |
| Conserved phage protein | CKY39_RS16220 | Not Available | Positive | 3514735 - 3515094 | 12544.1 |
| Tail protein | CKY39_RS16225 | Not Available | Positive | 3515205 - 3515852 | 22618.6 |
| Hypothetical protein | CKY39_RS16230 | Not Available | Positive | 3515852 - 3516163 | 11757.1 |
| Hypothetical protein | CKY39_RS16235 | Not Available | Positive | 3516247 - 3516468 | 8331.05 |
| Putative bacteriophage tail tape measure protein | CKY39_RS16240 | Not Available | Positive | 3516541 - 3519516 | 103954.0 |
| Hypothetical protein | CKY39_RS16245 | Not Available | Positive | 3519513 - 3520103 | 20462.7 |
| Putative capsid and scaffold protein | CKY39_RS16250 | Not Available | Positive | 3520100 - 3520684 | 20811.8 |
| Hypothetical protein | CKY39_RS16255 | Not Available | Positive | 3520681 - 3521076 | 13555.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
