Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | CKY39_RS02640 | Not Available | Positive | 582203 - 583138 | 32443.4 |
| caib/baif coa transferase family protein | CKY39_RS02645 | Not Available | Positive | 583131 - 584321 | 42798.9 |
| lysr family transcriptional regulator | CKY39_RS02650 | Not Available | Positive | 584354 - 585280 | 33657.2 |
| duf2214 family protein | CKY39_RS02655 | Not Available | Positive | 585346 - 585798 | 16703.3 |
| hypothetical protein | CKY39_RS02660 | Not Available | Negative | 585886 - 586251 | 11517.0 |
| arginine--trna ligase | CKY39_RS02665 | Not Available | Positive | 586384 - 588069 | 61134.5 |
| spor domain-containing protein | CKY39_RS02670 | Not Available | Positive | 588084 - 588851 | 25981.0 |
| thiol:disulfide interchange protein dsba/dsbl | CKY39_RS02675 | Not Available | Positive | 589004 - 589648 | 23210.8 |
| lipopolysaccharide transport periplasmic protein lpta | CKY39_RS02680 | Not Available | Positive | 589771 - 590490 | 24849.5 |
| lps export abc transporter atp-binding protein | CKY39_RS02685 | Not Available | Positive | 590487 - 591281 | 29027.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
