Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2917 domain-containing protein | CKY39_RS02590 | Not Available | Negative | 572064 - 572420 | 12616.8 |
| lysr substrate-binding domain-containing protein | CKY39_RS02595 | Not Available | Positive | 572503 - 573429 | 33672.5 |
| fasciclin domain-containing protein | CKY39_RS02600 | Not Available | Negative | 573431 - 574003 | 18834.9 |
| hypothetical protein | CKY39_RS02605 | Not Available | Positive | 574433 - 574660 | 8433.0 |
| hypothetical protein | CKY39_RS02610 | Not Available | Positive | 574653 - 575423 | 29461.5 |
| mfs transporter | CKY39_RS02615 | Not Available | Negative | 575510 - 576784 | 44651.5 |
| malate synthase g | CKY39_RS02620 | Not Available | Negative | 576934 - 579108 | 77821.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS02625 | Not Available | Positive | 579364 - 580347 | 34384.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS02630 | Not Available | Positive | 580401 - 581369 | 33596.7 |
| iclr family transcriptional regulator | CKY39_RS02635 | Not Available | Negative | 581373 - 582113 | 26419.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
