Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CKY39_RS02540 | Not Available | Positive | 562149 - 562946 | 27348.7 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS02545 | Not Available | Positive | 562943 - 563713 | 25906.9 |
| hypothetical protein | CKY39_RS02550 | Not Available | Positive | 563768 - 564187 | 15340.6 |
| abc transporter substrate-binding protein | CKY39_RS02555 | Not Available | Negative | 564207 - 565292 | 37665.6 |
| dha2 family efflux mfs transporter permease subunit | CKY39_RS02560 | Not Available | Negative | 565430 - 566920 | 52480.6 |
| putative zinc-binding metallopeptidase | CKY39_RS02565 | Not Available | Positive | 567060 - 568391 | 48699.3 |
| cysteine-rich cwc family protein | CKY39_RS02570 | Not Available | Negative | 568382 - 568600 | 7619.25 |
| 6-phosphofructokinase | CKY39_RS02575 | Not Available | Negative | 568597 - 569853 | 44949.7 |
| acyl-coa dehydrogenase family protein | CKY39_RS02580 | Not Available | Negative | 569912 - 571069 | 42666.2 |
| enoyl-coa hydratase-related protein | CKY39_RS02585 | Not Available | Negative | 571077 - 571898 | 29594.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
