Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate/h(+) symporter bene family transporter | CKY39_RS02440 | Not Available | Positive | 539627 - 540913 | 43682.2 |
| glutathione synthase | CKY39_RS02445 | Not Available | Positive | 540913 - 541866 | 34910.3 |
| tonb-dependent receptor | CKY39_RS02450 | Not Available | Negative | 541867 - 544083 | 79061.8 |
| class ii glutamine amidotransferase | CKY39_RS02455 | Not Available | Negative | 544199 - 544966 | 28941.1 |
| chap domain-containing protein | CKY39_RS02460 | Not Available | Negative | 544987 - 545607 | 22578.0 |
| class ii histone deacetylase | CKY39_RS02465 | Not Available | Negative | 545680 - 546792 | 40153.9 |
| branched-chain amino acid abc transporter permease | CKY39_RS02470 | Not Available | Negative | 546789 - 547820 | 36584.5 |
| branched-chain amino acid abc transporter permease | CKY39_RS02475 | Not Available | Negative | 547831 - 548697 | 30568.4 |
| abc transporter atp-binding protein | CKY39_RS02480 | Not Available | Negative | 548711 - 549409 | 25005.5 |
| abc transporter atp-binding protein | CKY39_RS02485 | Not Available | Negative | 549396 - 550151 | 26788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
