Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | CKY39_RS02385 | Not Available | Negative | 522016 - 524094 | 75886.5 |
| 1,4-alpha-glucan branching protein glgb | CKY39_RS02395 | Not Available | Negative | 524801 - 526981 | 81230.1 |
| alpha-amylase family glycosyl hydrolase | CKY39_RS02400 | Not Available | Negative | 526987 - 528645 | 60941.7 |
| flavin-containing monooxygenase | CKY39_RS02405 | Not Available | Positive | 528776 - 530251 | 53074.0 |
| leucine--trna ligase | CKY39_RS02410 | Not Available | Positive | 530339 - 532969 | 97647.6 |
| lps assembly lipoprotein lpte | CKY39_RS02415 | Not Available | Positive | 533005 - 533526 | 18767.7 |
| dna polymerase iii subunit delta | CKY39_RS02420 | Not Available | Positive | 533547 - 534617 | 38775.8 |
| glutamate-5-semialdehyde dehydrogenase | CKY39_RS02425 | Not Available | Positive | 534682 - 535974 | 45645.0 |
| glutamate--cysteine ligase | CKY39_RS02430 | Not Available | Positive | 536159 - 537475 | 48302.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS02435 | Not Available | Positive | 537632 - 539499 | 65416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
