Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | CKY39_RS02235 | Not Available | Negative | 489870 - 491588 | 62044.9 |
| trna 2-thiouridine(34) synthase mnma | CKY39_RS02240 | Not Available | Positive | 491734 - 492834 | 40244.5 |
| nudix hydrolase | CKY39_RS02245 | Not Available | Negative | 492842 - 493315 | 17578.9 |
| duf4019 domain-containing protein | CKY39_RS02250 | Not Available | Negative | 493344 - 493772 | 15889.0 |
| response regulator transcription factor | CKY39_RS02255 | Not Available | Negative | 493856 - 494578 | 27457.2 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | CKY39_RS02260 | Not Available | Positive | 494980 - 496110 | 38490.6 |
| aspartate 1-decarboxylase | CKY39_RS02265 | Not Available | Positive | 496127 - 496489 | 13244.9 |
| nad(p) transhydrogenase subunit alpha | CKY39_RS02270 | Not Available | Positive | 496539 - 496868 | 11449.6 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | CKY39_RS02275 | Not Available | Positive | 496865 - 498364 | 52209.6 |
| long-chain-fatty-acid--coa ligase | CKY39_RS02280 | Not Available | Positive | 498465 - 500144 | 60632.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
