Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS16160 | Not Available | Positive | 3506232 - 3506429 | 7527.19 |
| Hnh endonuclease | CKY39_RS16165 | Not Available | Positive | 3507081 - 3507320 | 9104.03 |
| Terminase small subunit | CKY39_RS16170 | Not Available | Positive | 3507392 - 3507988 | 21278.7 |
| Terminase large subunit-like protein | CKY39_RS16175 | Not Available | Positive | 3508013 - 3509674 | 61772.3 |
| Portal protein | CKY39_RS16180 | Not Available | Positive | 3509671 - 3510894 | 45154.9 |
| Phage head maturation protease | CKY39_RS16185 | Not Available | Positive | 3510875 - 3511567 | 25256.0 |
| Major capsid protein precursor | CKY39_RS16190 | Not Available | Positive | 3511577 - 3512968 | 50220.5 |
| hypothetical protein | CKY39_RS16195 | Not Available | Positive | 3513030 - 3513356 | 10908.2 |
| Dna packaging-like protein | CKY39_RS16200 | Not Available | Positive | 3513366 - 3513593 | 8148.04 |
| head-tail connector protein | CKY39_RS16205 | Not Available | Positive | 3513590 - 3513937 | 12730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
