Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin domain-containing protein | CKY39_RS02090 | Not Available | Negative | 453710 - 458431 | 165950.0 |
| class i fructose-bisphosphate aldolase | CKY39_RS02095 | Not Available | Negative | 458643 - 459494 | 31174.6 |
| aldo/keto reductase | CKY39_RS02100 | Not Available | Negative | 459545 - 460525 | 35023.8 |
| abc transporter permease | CKY39_RS02105 | Not Available | Negative | 460540 - 461580 | 36162.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS02110 | Not Available | Negative | 461577 - 463110 | 53327.6 |
| substrate-binding domain-containing protein | CKY39_RS02115 | Not Available | Negative | 463107 - 464153 | 37312.9 |
| fggy family carbohydrate kinase | CKY39_RS02120 | Not Available | Positive | 464334 - 465821 | 50471.6 |
| glycerol-3-phosphate dehydrogenase/oxidase | CKY39_RS02125 | Not Available | Positive | 465818 - 467587 | 63459.4 |
| gntr family transcriptional regulator | CKY39_RS02130 | Not Available | Positive | 467589 - 468356 | 28515.3 |
| dmt family transporter | CKY39_RS02135 | Not Available | Negative | 468359 - 469255 | 32221.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
