Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | CKY39_RS02040 | Not Available | Positive | 445923 - 446531 | 22173.6 |
| smi1/knr4 family protein | CKY39_RS02045 | Not Available | Positive | 446535 - 447173 | 23467.3 |
| sdr family oxidoreductase | CKY39_RS02050 | Not Available | Positive | 447207 - 447911 | 24748.6 |
| class i sam-dependent dna methyltransferase | CKY39_RS02055 | Not Available | Positive | 447929 - 448537 | 21868.2 |
| abc transporter atp-binding protein | CKY39_RS02060 | Not Available | Negative | 448560 - 449288 | 26154.8 |
| abc transporter atp-binding protein | CKY39_RS02065 | Not Available | Negative | 449285 - 450040 | 27003.8 |
| branched-chain amino acid abc transporter permease | CKY39_RS02070 | Not Available | Negative | 450037 - 451026 | 34559.2 |
| branched-chain amino acid abc transporter permease | CKY39_RS02075 | Not Available | Negative | 451023 - 451943 | 31734.7 |
| abc transporter substrate-binding protein | CKY39_RS02080 | Not Available | Negative | 451960 - 453165 | 42673.0 |
| f0f1 atp synthase subunit c | CKY39_RS02085 | Not Available | Negative | 453323 - 453562 | 8127.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
