Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | CKY39_RS01990 | Not Available | Negative | 435846 - 436295 | 15936.3 |
| lysr family transcriptional regulator | CKY39_RS01995 | Not Available | Negative | 436381 - 437277 | 33076.0 |
| gentisate 1,2-dioxygenase | CKY39_RS02000 | Not Available | Positive | 437409 - 438491 | 39639.9 |
| fumarylacetoacetate hydrolase family protein | CKY39_RS02005 | Not Available | Positive | 438562 - 439266 | 25373.4 |
| 3-hydroxybenzoate 6-monooxygenase | CKY39_RS02010 | Not Available | Positive | 439283 - 440497 | 44005.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS02015 | Not Available | Positive | 440554 - 441534 | 34909.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS02020 | Not Available | Positive | 441620 - 442597 | 34099.6 |
| fad-dependent oxidoreductase | CKY39_RS02025 | Not Available | Positive | 442597 - 443958 | 47876.0 |
| hypothetical protein | CKY39_RS02030 | Not Available | Positive | 444174 - 444869 | 25049.1 |
| acyl-coa thioesterase | CKY39_RS02035 | Not Available | Positive | 444965 - 445879 | 33610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
