Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CKY39_RS01945 | Not Available | Negative | 421856 - 422749 | 33310.1 |
| caib/baif coa transferase family protein | CKY39_RS01950 | Not Available | Positive | 423056 - 424294 | 42773.6 |
| acyl-coa-binding protein | CKY39_RS01955 | Not Available | Negative | 424299 - 424556 | 9387.0 |
| type vi secretion system vgr family protein | CKY39_RS01960 | Not Available | Positive | 424764 - 427919 | 111946.0 |
| duf6531 domain-containing protein | CKY39_RS34065 | Not Available | Positive | 428001 - 430484 | 90346.6 |
| rhs repeat domain-containing protein | CKY39_RS01965 | Not Available | Positive | 430376 - 433102 | 101089.0 |
| hypothetical protein | CKY39_RS01970 | Not Available | Positive | 433112 - 433393 | 10354.3 |
| hypothetical protein | CKY39_RS01975 | Not Available | Negative | 433580 - 434428 | 30230.0 |
| tetr/acrr family transcriptional regulator | CKY39_RS01980 | Not Available | Negative | 434436 - 435143 | 26756.9 |
| phasin family protein | CKY39_RS01985 | Not Available | Negative | 435270 - 435758 | 17290.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
