Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CKY39_RS01895 | Not Available | Negative | 409809 - 410942 | 39988.0 |
| molybdopterin-dependent oxidoreductase | CKY39_RS01900 | Not Available | Positive | 411001 - 413061 | 74960.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS01905 | Not Available | Positive | 413061 - 414199 | 41683.2 |
| polyhydroxyalkanoic acid system family protein | CKY39_RS01910 | Not Available | Positive | 414192 - 414506 | 11583.4 |
| sdr family oxidoreductase | CKY39_RS01915 | Not Available | Negative | 414525 - 415262 | 24743.9 |
| fggy-family carbohydrate kinase | CKY39_RS01920 | Not Available | Negative | 415557 - 417083 | 54772.6 |
| alcohol dehydrogenase catalytic domain-containing protein | CKY39_RS01925 | Not Available | Negative | 417080 - 418225 | 40620.3 |
| abc transporter permease | CKY39_RS01930 | Not Available | Negative | 418273 - 419253 | 33153.7 |
| sugar abc transporter atp-binding protein | CKY39_RS01935 | Not Available | Negative | 419250 - 420767 | 54327.1 |
| abc transporter substrate-binding protein | CKY39_RS01940 | Not Available | Negative | 420816 - 421736 | 31876.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
