Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CKY39_RS01740 | Not Available | Negative | 375016 - 375909 | 32168.1 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | CKY39_RS01745 | Not Available | Positive | 376011 - 377528 | 53944.1 |
| gmc family oxidoreductase | CKY39_RS01750 | Not Available | Positive | 377600 - 379234 | 59767.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34060 | Not Available | Negative | 379630 - 379992 | 13834.7 |
| aldehyde dehydrogenase family protein | CKY39_RS01765 | Not Available | Positive | 379991 - 381529 | 54418.3 |
| amino acid abc transporter substrate-binding protein | CKY39_RS01770 | Not Available | Positive | 381629 - 382537 | 32538.5 |
| pyridoxal phosphate-dependent aminotransferase | CKY39_RS01775 | Not Available | Positive | 382534 - 383751 | 43010.5 |
| thiamine pyrophosphate-binding protein | CKY39_RS01780 | Not Available | Positive | 383781 - 385454 | 59920.9 |
| hypothetical protein | CKY39_RS01785 | Not Available | Negative | 385462 - 385764 | 11186.4 |
| ammonium transporter | CKY39_RS01790 | Not Available | Negative | 385783 - 387021 | 42626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
