Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS12335 | Not Available | Positive | 2702514 - 2702927 | 14904.1 |
| Virion associated protein | CKY39_RS12340 | Not Available | Positive | 2702940 - 2703725 | 27486.7 |
| Tail tape measure protein | CKY39_RS12345 | Not Available | Positive | 2703833 - 2706553 | 92508.4 |
| Hypothetical protein | CKY39_RS12350 | Not Available | Positive | 2706556 - 2706951 | 14010.0 |
| Putative tail protein b | CKY39_RS12355 | Not Available | Positive | 2706948 - 2710532 | 124325.0 |
| Attr | Not Available | Not Available | Positive | 2721892 - 2721941 | Not Available |
| Attl | Not Available | Not Available | Positive | 3498782 - 3498794 | Not Available |
| Orf003 | CKY39_RS16145 | Not Available | Positive | 3502092 - 3504797 | 99907.3 |
| hypothetical protein | CKY39_RS16150 | Not Available | Positive | 3505185 - 3505490 | 11139.4 |
| hypothetical protein | CKY39_RS16155 | Not Available | Positive | 3505780 - 3506184 | 14953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
