Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | CKY39_RS01690 | Not Available | Negative | 365956 - 367593 | 59970.8 |
| mbl fold metallo-hydrolase | CKY39_RS01695 | Not Available | Negative | 367658 - 368617 | 35211.7 |
| iclr family transcriptional regulator | CKY39_RS01700 | Not Available | Positive | 368767 - 369630 | 30292.3 |
| sir2 family nad-dependent protein deacylase | CKY39_RS01705 | Not Available | Positive | 369627 - 370400 | 27603.3 |
| gfa family protein | CKY39_RS01710 | Not Available | Negative | 370405 - 370899 | 18204.9 |
| hypothetical protein | CKY39_RS01715 | Not Available | Negative | 370919 - 371140 | 7356.27 |
| abc-type transport auxiliary lipoprotein family protein | CKY39_RS01720 | Not Available | Negative | 371181 - 371870 | 24345.2 |
| mlad family protein | CKY39_RS01725 | Not Available | Negative | 371894 - 372850 | 33522.7 |
| abc transporter atp-binding protein | CKY39_RS01730 | Not Available | Negative | 372859 - 373713 | 30394.9 |
| mlae family abc transporter permease | CKY39_RS01735 | Not Available | Negative | 373710 - 374882 | 41529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
