Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS01590 | Not Available | Negative | 344260 - 345222 | 33249.4 |
| flavin-dependent oxidoreductase | CKY39_RS01595 | Not Available | Negative | 345263 - 346513 | 45338.2 |
| lysr family transcriptional regulator | CKY39_RS01600 | Not Available | Positive | 346586 - 347485 | 32592.8 |
| duf4034 domain-containing protein | CKY39_RS01605 | Not Available | Negative | 347489 - 349420 | 71474.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34820 | Not Available | Negative | 349726 - 350316 | 21704.7 |
| hypothetical protein | CKY39_RS01615 | Not Available | Negative | 350357 - 351667 | 48687.5 |
| exodeoxyribonuclease iii | CKY39_RS01620 | Not Available | Negative | 351683 - 352486 | 30075.7 |
| orotate phosphoribosyltransferase | CKY39_RS01625 | Not Available | Positive | 352499 - 353179 | 23970.5 |
| duf4124 domain-containing protein | CKY39_RS01630 | Not Available | Positive | 353192 - 353884 | 25994.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | CKY39_RS01635 | Not Available | Negative | 353931 - 355421 | 53878.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
