Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transaminase | CKY39_RS01545 | Not Available | Positive | 335128 - 336033 | 33318.8 |
| zinc-finger domain-containing protein | CKY39_RS01550 | Not Available | Positive | 336042 - 336251 | 7592.14 |
| o-antigen ligase family protein | CKY39_RS01555 | Not Available | Negative | 336301 - 337251 | 34150.3 |
| hypothetical protein | CKY39_RS34050 | Not Available | Negative | 337251 - 337529 | 10232.8 |
| atp-binding protein | CKY39_RS01560 | Not Available | Negative | 337595 - 338803 | 43556.5 |
| response regulator transcription factor | CKY39_RS01565 | Not Available | Negative | 338824 - 339546 | 26618.4 |
| beta-ketoacyl synthase chain length factor | CKY39_RS01570 | Not Available | Negative | 339749 - 340570 | 27699.0 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CKY39_RS01575 | Not Available | Negative | 340567 - 341769 | 41650.1 |
| ampg family muropeptide mfs transporter | CKY39_RS01580 | Not Available | Negative | 341925 - 343319 | 49588.6 |
| m48 family metallopeptidase | CKY39_RS01585 | Not Available | Positive | 343381 - 344235 | 30217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
