Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradation operon regulator hpar | CKY39_RS01495 | Not Available | Negative | 324910 - 325347 | 16397.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS01500 | Not Available | Negative | 325702 - 326706 | 34560.8 |
| fad-dependent oxidoreductase | CKY39_RS01505 | Not Available | Negative | 326703 - 328403 | 62332.0 |
| lysr family transcriptional regulator | CKY39_RS01510 | Not Available | Positive | 328505 - 329404 | 32056.1 |
| dna repair protein rada | CKY39_RS01515 | Not Available | Positive | 329428 - 330819 | 48607.7 |
| bcct family transporter | CKY39_RS01520 | Not Available | Positive | 330860 - 332377 | 54943.0 |
| hypothetical protein | CKY39_RS01525 | Not Available | Negative | 332483 - 332938 | 15299.0 |
| voc family protein | CKY39_RS01530 | Not Available | Positive | 333111 - 333500 | 13540.2 |
| glycerate kinase | CKY39_RS01535 | Not Available | Positive | 333488 - 333916 | 15500.9 |
| recombination-associated protein rdgc | CKY39_RS01540 | Not Available | Negative | 333948 - 334946 | 35980.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
