Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxoheptanedioate aldolase | CKY39_RS01445 | Not Available | Negative | 316750 - 317571 | 28656.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS01450 | Not Available | Negative | 317583 - 318385 | 27773.3 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CKY39_RS01455 | Not Available | Negative | 318403 - 318810 | 14908.8 |
| extradiol ring-cleavage dioxygenase | CKY39_RS01460 | Not Available | Negative | 318824 - 319651 | 30161.0 |
| aromatic ring-opening dioxygenase subunit liga | CKY39_RS01465 | Not Available | Negative | 319648 - 319983 | 12154.6 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS01470 | Not Available | Negative | 319987 - 320961 | 33862.0 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | CKY39_RS01475 | Not Available | Negative | 320958 - 322424 | 52387.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS01480 | Not Available | Negative | 322462 - 323463 | 35087.4 |
| fumarylacetoacetate hydrolase family protein | CKY39_RS01485 | Not Available | Negative | 323511 - 324281 | 28430.9 |
| fumarylacetoacetate hydrolase family protein | CKY39_RS01490 | Not Available | Negative | 324278 - 324913 | 22323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
