Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS01395 | Not Available | Positive | 307025 - 307756 | 26101.0 |
| lysr family transcriptional regulator | CKY39_RS01400 | Not Available | Negative | 307734 - 308615 | 32400.1 |
| dmt family transporter | CKY39_RS01405 | Not Available | Positive | 308757 - 309713 | 33126.0 |
| yebc/pmpr family dna-binding transcriptional regulator | CKY39_RS01410 | Not Available | Positive | 309808 - 310521 | 25259.0 |
| hypothetical protein | CKY39_RS01415 | Not Available | Positive | 310852 - 311646 | 28305.6 |
| 2-dehydropantoate 2-reductase | CKY39_RS01420 | Not Available | Negative | 311662 - 312639 | 34207.9 |
| class ii aldolase/adducin family protein | CKY39_RS01425 | Not Available | Negative | 312653 - 313441 | 28564.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS01430 | Not Available | Negative | 313460 - 314452 | 34490.6 |
| dihydroxy-acid dehydratase | CKY39_RS01435 | Not Available | Negative | 314490 - 316223 | 60231.3 |
| ester cyclase | CKY39_RS01440 | Not Available | Negative | 316261 - 316728 | 16968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
