Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | CKY39_RS01345 | Not Available | Positive | 295888 - 296775 | 32450.9 |
| l-lactate permease | CKY39_RS01350 | Not Available | Positive | 296891 - 298552 | 59277.9 |
| fad-linked oxidase c-terminal domain-containing protein | CKY39_RS01355 | Not Available | Positive | 298567 - 300069 | 53215.1 |
| glycolate oxidase subunit glce | CKY39_RS01360 | Not Available | Positive | 300077 - 301201 | 39194.9 |
| glycolate oxidase subunit glcf | CKY39_RS01365 | Not Available | Positive | 301224 - 302462 | 44397.7 |
| hypothetical protein | CKY39_RS01370 | Not Available | Positive | 302561 - 302995 | 14721.6 |
| glutathione peroxidase | CKY39_RS01375 | Not Available | Negative | 302998 - 303486 | 17502.0 |
| dmt family transporter | CKY39_RS01380 | Not Available | Negative | 303499 - 304389 | 30925.4 |
| lysophospholipid transporter lplt | CKY39_RS01385 | Not Available | Negative | 304450 - 305754 | 46688.2 |
| alanine racemase | CKY39_RS01390 | Not Available | Positive | 305926 - 307023 | 39740.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
