Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS12285 | Not Available | Positive | 2693732 - 2694265 | 18781.2 |
| Terminase large subunit a | CKY39_RS12290 | Not Available | Positive | 2694265 - 2696304 | 75726.6 |
| Hypothetical protein | CKY39_RS12295 | Not Available | Positive | 2696307 - 2696609 | 11409.8 |
| restriction endonuclease | CKY39_RS12300 | Not Available | Negative | 2696636 - 2697529 | 34069.4 |
| hypothetical protein | CKY39_RS12305 | Not Available | Positive | 2697522 - 2697761 | 8581.36 |
| Portal protein | CKY39_RS12310 | Not Available | Positive | 2697788 - 2699395 | 58999.8 |
| Prohead protease clpp | CKY39_RS12315 | Not Available | Positive | 2699392 - 2700738 | 46006.1 |
| Hypothetical protein | CKY39_RS12320 | Not Available | Positive | 2700765 - 2701142 | 12558.9 |
| Major capsid protein | CKY39_RS12325 | Not Available | Positive | 2701188 - 2702201 | 37227.6 |
| hypothetical protein | CKY39_RS12330 | Not Available | Positive | 2702212 - 2702514 | 10217.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
