Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid synthesis family protein | CKY39_RS01150 | Not Available | Positive | 245426 - 246010 | 20317.5 |
| abc transporter substrate-binding protein | CKY39_RS01155 | Not Available | Positive | 246070 - 247275 | 43746.3 |
| abc transporter permease | CKY39_RS01160 | Not Available | Positive | 247357 - 249282 | 68498.5 |
| abc transporter atp-binding protein | CKY39_RS01165 | Not Available | Positive | 249279 - 250070 | 28614.1 |
| abc transporter atp-binding protein | CKY39_RS01170 | Not Available | Positive | 250067 - 250801 | 26997.8 |
| bifunctional nicotinamidase/pyrazinamidase | CKY39_RS01175 | Not Available | Positive | 250836 - 251561 | 25433.5 |
| abc transporter substrate-binding protein | CKY39_RS01180 | Not Available | Positive | 251632 - 252792 | 41241.7 |
| (2fe-2s)-binding protein | CKY39_RS01185 | Not Available | Positive | 252770 - 253282 | 17704.4 |
| molybdopterin cofactor-binding domain-containing protein | CKY39_RS01190 | Not Available | Positive | 253279 - 257010 | 132405.0 |
| fumarylacetoacetate hydrolase family protein | CKY39_RS01195 | Not Available | Positive | 257075 - 258262 | 41492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
