Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | CKY39_RS01100 | Not Available | Positive | 233145 - 235859 | 99853.0 |
| arnt family glycosyltransferase | CKY39_RS01105 | Not Available | Positive | 235960 - 237717 | 64567.2 |
| glycosyltransferase family 2 protein | CKY39_RS01110 | Not Available | Positive | 237806 - 238702 | 32394.3 |
| gtra family protein | CKY39_RS01115 | Not Available | Positive | 238713 - 239126 | 14736.0 |
| amidohydrolase family protein | CKY39_RS01120 | Not Available | Negative | 239155 - 240354 | 41324.4 |
| tetr family transcriptional regulator | CKY39_RS01125 | Not Available | Negative | 240309 - 241076 | 28566.7 |
| ferredoxin--nadp reductase | CKY39_RS01130 | Not Available | Negative | 241105 - 241878 | 29180.1 |
| 6-hydroxynicotinate reductase | CKY39_RS01135 | Not Available | Positive | 242198 - 243817 | 57207.7 |
| upf0280 family protein | CKY39_RS01140 | Not Available | Positive | 243821 - 244723 | 31923.9 |
| amino acid synthesis family protein | CKY39_RS01145 | Not Available | Positive | 244745 - 245386 | 22801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
